I Found Out My Accountant Hasn’t Filed My Taxes For Three Years. Am I On The Hook For Penalties?

I Found Out My Accountant Hasn’t Filed My Taxes For Three Years. Am I On The Hook For Penalties?


November 21, 2025 | Jane O'Shea

I Found Out My Accountant Hasn’t Filed My Taxes For Three Years. Am I On The Hook For Penalties?


1Mikhail Nilov, Pexels

Finding out your taxes haven’t been filed hits like cold water down your back. The air gets tight. Your mind jumps straight to the IRS knocking on your door or your refund disappearing. But here’s the real kicker: even when an accountant drops the ball, the IRS sees you as the taxpayer of record. That means your next steps matter far more than their excuses. 

Ready to get clarity and take back control? Let’s walk through what the law actually says and what you can do right now.

Who The IRS Holds Responsible (And It’s Not Your Accountant)

In tax law, responsibility doesn’t transfer. The IRS views the taxpayer—not the preparer—as the person legally required to file. Preparers can be penalized for fraud, negligence, or misconduct, but that has zero effect on your obligation. If returns weren't filed, they’re still considered delinquent regardless of who caused the delay.

Even so, the IRS rarely jumps straight to aggressive action for late filers unless the income was high and the years were ignored. The agency’s first move is usually a notice that gives you time to respond. That buys breathing room, especially if the missing returns are straightforward W-2 or 1099 filings. The goal now is to get ahead of the IRS rather than wait for their version of your income to surface.

Who The IRS Holds Responsible (And It’s Not Your Accountant)Nataliya Vaitkevich, Pexels

Advertisement

Late-Filing Penalties You Might Face

The typical charge is the failure-to-file penalty, which runs at 5 percent of the unpaid tax per month, capped at 25 percent. Then there’s the failure-to-pay penalty, smaller at 0.5 percent per month, but still applied. Interest compounds daily. If you were owed refunds, though, the penalty disappears because penalties apply only when tax is due.

That refund detail helps soften the shock. When refunds are involved, filing late doesn’t punish you financially—although you lose the refund permanently once the return is more than three years overdue. For many people who discover missing filings, this “statute of refund expiration” ends up being the biggest loss. That’s why acting now matters more than waiting for the dust to settle.

How To Correct The Situation (And Protect Yourself)

You won’t need to file every missing year back to infinity. The IRS typically requires the most recent six years for compliance, but they often request fewer when income was modest and there’s no sign of intent to evade. For a three-year lapse, filing those returns is usually enough to restore good standing.

Even better, the IRS offers First-Time Penalty Abatement when you have a clean history for the previous three years. If you qualify, the failure-to-file penalty for one year can be waived. For the others, reasonable cause relief may apply—especially when you relied on a professional who misrepresented the status of your filings. Documentation helps here: emails, invoices, messages, or proof of timely submission of documents to the preparer.

Once the returns are complete, the IRS will calculate the balance and set up arrangements if needed. The agency’s installment agreements are far more flexible than people expect, more so if you come forward voluntarily. And voluntary compliance looks much better than waiting for an automated notice to force the issue.

How To Correct The Situation (And Protect Yourself)Vitaly Gariev, Pexels

Advertisement

When Your Accountant Is Actually At Fault

If you can prove misconduct—falsifying filing confirmations, withholding documents, ignoring instructions—you may have grounds for a complaint with the preparer oversight office or state licensing board. Professional penalties target the preparer, not you, but they create a record that helps justify penalty relief requests.

These steps won’t erase your filing duties, yet they show the IRS you acted in good faith. That matters. The agency cares about behavior more than blame. People who respond quickly get far gentler treatment than those who let unopened envelopes stack up on the kitchen table.

The Smartest Next Move

Gather your income documents, pull IRS transcripts for the missing years, and get a reputable professional to reconstruct each return. Once you see the full picture—refunds, balances, credits—you’ll know what comes next. These filings can clear your record faster than you expect.

The Smartest Next MoveKampus Production, Pexels

Advertisement

READ MORE

airlinescovidinternal

(How) Will Airlines Survive COVID-19?

As the crisis continues, airlines are hemhorraging money. Will airlines survive this crisis? And if so, how?
January 7, 2021 Eul Basa
hospital_internal

Drama Is The Best Medicine: Doctors And Patients Reveal Their Craziest Cases

There is a reason why shows like Gray's Anatomy and ER are so addictive: Hospital drama is insane, and not just on TV—that stuff happens in real life, too.
February 10, 2021 Eul Basa
cases_internal

Move To Strike: These Lawyers' Cases Unraveled In An Instant

Courtroom cases can take months or even years to go in front of a judge. Then, in the blink of an eye, it can all unravel spectacularly.
February 10, 2021 Eul Basa
customerservice_internal

Customer Service Nightmares: These Awful Moments On The Job Had Us Cringing Hard

There's one unfortunate side of working in customer service that's just unavoidable: customers. If you've ever worked with customers, you'll relate.
March 1, 2021 Eul Basa
teachers_internal

These Cruel Teachers Are The Stuff Of Student Nightmares

While it can seem like teachers don't know much more than their students, these traumatized pupils think the story's a little more complicated.
March 1, 2021 Eul Basa
doctors_internal

Crash Cart: Doctors Reveal The Harrowing Moments They'll Never Forget

From one-in-a-million cases to deranged patients and everything in between, these doctors have shared the medical moments they will never—ever—forget.
March 1, 2021 Eul Basa


Disclaimer

The information on MoneyMade.com is intended to support financial literacy and should not be considered tax or legal advice. It is not meant to serve as a forecast, research report, or investment recommendation, nor should it be taken as an offer or solicitation to buy or sell any securities or adopt any particular investment strategy. All financial, tax, and legal decisions should be made with the help of a qualified professional. We do not guarantee the accuracy, timeliness, or outcomes associated with the use of this content.





Dear reader,


It’s true what they say: money makes the world go round. In order to succeed in this life, you need to have a good grasp of key financial concepts. That’s where Moneymade comes in. Our mission is to provide you with the best financial advice and information to help you navigate this ever-changing world. Sometimes, generating wealth just requires common sense. Don’t max out your credit card if you can’t afford the interest payments. Don’t overspend on Christmas shopping. When ordering gifts on Amazon, make sure you factor in taxes and shipping costs. If you need a new car, consider a model that’s easy to repair instead of an expensive BMW or Mercedes. Sometimes you dream vacation to Hawaii or the Bahamas just isn’t in the budget, but there may be more affordable all-inclusive hotels if you know where to look.


Looking for a new home? Make sure you get a mortgage rate that works for you. That means understanding the difference between fixed and variable interest rates. Whether you’re looking to learn how to make money, save money, or invest your money, our well-researched and insightful content will set you on the path to financial success. Passionate about mortgage rates, real estate, investing, saving, or anything money-related? Looking to learn how to generate wealth? Improve your life today with Moneymade. If you have any feedback for the MoneyMade team, please reach out to [email protected]. Thanks for your help!


Warmest regards,

The Moneymade team